Highlighted Publications

Developmental timing distinguishes pediatric and adult cancers through retention and rewiring mechanisms.

Nature Communications, Jul 03, 2026

In this Perspective, we propose a unifying model in which developmental timing determines how the same oncogenic mutation shapes pediatric versus adult cancers. We distinguish early-life “retention” lesions, which stabilize already-active embryo-fetal transcriptional and epigenetic programs with few additional hits, from later-life “rewiring” lesions, which reactivate silenced developmental states through stepwise transcriptional and chromatin remodeling. Drawing on neuroblastoma, AML, and B-ALL, we argue that the epigenetic state of the cell of origin, not chronological age alone, dictates lineage trajectory, clinical behavior, and therapy response, motivating the integration of developmental timing into cancer risk stratification and treatment.

Ontogeny Dictates Oncogenic Potential, Lineage Hierarchy, and Therapy Response in Pediatric Leukemia

Cancer Discovery, Mar 02, 2026

In this recently published study, we investigated the role of the NUP98-NSD1 fusion oncogene in pediatric acute myeloid leukemia (AML), demonstrating that its expression in human hematopoietic stem and progenitor cells leads to leukemic transformation. We further elucidated that the oncogenic potential of NUP98-NSD1 is influenced by the ontogeny of the cells, highlighting the importance of developmental context in leukemia pathogenesis.

A CRISPR-Based Humanized Model Reveals Cooperative Role of STAG2 Loss in Familial GATA2-Deficient MDS Progression

bioRxiv [Preprint], Feb 02, 2026

In this preprint, we developed a CRISPR/Cas9-engineered humanized model of familial GATA2-deficient myelodysplastic syndrome (MDS) to define how STAG2 loss cooperates in disease progression. Genome editing of primary human hematopoietic stem and progenitor cells followed by xenotransplantation demonstrates that STAG2 loss enhances stem cell persistence and myeloid skewing in the context of GATA2 deficiency. Single-cell analyses identify transcriptional programs linked to stemness and inflammatory signaling, providing mechanistic insight into high-risk GATA2-mutant MDS evolution.

Overcoming B-ALL Resistance to Targeted and Immune Therapies by Rational Combination Strategies

Blood Cancer Discovery, May 02, 2025

We recently wrote a review on overcoming resistance to targeted and immune therapies in B-cell acute lymphoblastic leukemia (B-ALL), highlighting rational combination strategies aimed at improving patient outcomes. The article emphasizes integration of targeted therapies, such as tyrosine kinase inhibitors and venetoclax, with immunotherapies like bispecific antibodies, antibody-drug conjugates, and CAR T-cells. It discusses mechanisms of resistance, including antigen escape and signalling pathway adaptations, and outlines novel combination approaches to enhance therapeutic efficacy and durability, significantly advancing translational hematology research

Publications Archive

Human haematopoietic stem cells remember inflammatory stress.

Nature, Jul 03, 2026

Zeng AGX, Nagree MS, Jakobsen NA, Shah S, Varesi A, Kang JRW, Murison A, Cheong JG, Turkalj S, Zhang X, Radtke FA, Abera TA, Lim INX, Jin L, Araújo J, Aguilar-Navarro AG, Parris D, McLeod J, Kim H, Lee HS, Zhang L, Boulanger M, Bader E, Gbeha E, Parkhurst CN, Wagenblast E, Flores-Figueroa E, Wang B, Schwartz GW, Shultz LD, Nam AS, Grimes HL, Josefowicz SZ, Awadalla P, Vyas P, Dick JE, Xie SZ.

Ontogeny Dictates Oncogenic Potential, Lineage Hierarchy, and Therapy Response in Pediatric Leukemia

Cancer Discovery, Mar 02, 2026

Wang K, Saniei S, Poddar N, Martinez IG, Chao C, Autar S, Fiore P, Carcamo S, Sreenath M, Peplinski JH, Ries RE, Mei AHC, Rahman NA, Mekerishvili L, Quijada-Álamo M, Freed G, Zhang M, Lachman K, Diaz Z, Gonzalez MM, Zhang J, Pham G, Filipescu D, Berisa M, Balestra T, Wheeler N, Reisz JA, D'Alessandro A, Puleston DJ, Bernstein E, Chipuk JE, Wunderlich M, Tasian SK, Marcellino BK, Glass IA, BDRL, Sturgeon CM, Landau DA, Chen Z, Papapetrou EP, Izzo F, Meshinchi S, Hasson D, Wagenblast E

A CRISPR-Based Humanized Model Reveals Cooperative Role of STAG2 Loss in Familial GATA2-Deficient MDS Progression

bioRxiv [Preprint], Feb 02, 2026

Freed G, Quijada-Álamo M, Lee L, Podar N, Autar S, Carcamo S, Fiore P, Wang K, Martinez IG, Zhang M, Saniei S, Chao C, Mekerishvili L, Diaz Z, Ma S, Hasson D, Wagenblast E

Learning the cellular origins across cancers using single-cell chromatin landscapes

Nature Communications, Dec 10, 2025

Bairakdar MD, Lee W, Giotti B, Kumar A, Stancl P, Wagenblast E, Hambardzumyan D, Polak P, Karlic R, Tsankov AM

Overcoming B-ALL Resistance to Targeted and Immune Therapies by Rational Combination Strategies

Blood Cancer Discovery, May 02, 2025

Quijada-Álamo M, Freed G, Wagenblast E

Insights on Future Directions in Cancer Research from the 2025 AACR NextGen Stars

Cancer Discovery, May 02, 2025

Chan EM, Chhabra Y, Dixon KO, Durbin AD, Färkkilä A, Jeyasekharan AD, Keckesova Z, Prensner JR, Wagenblast E, Xie SZ, Zhao D

Models to Study Myelodysplastic Syndrome and Acute Myeloid Leukemia

Current Opinion in Hematology, Mar 01, 2025

Chao C, Martinez IG, Wagenblast E

FLT3 is genetically essential for ITD-mutated leukemic stem cells but dispensable for human hematopoietic stem cells

Blood, Jan 26, 2025

Araújo JL, Wagenblast E, Voisin V, McLeod J, Gan OI, Bansal S, Jin L, Mitchell A, Gratton B, Cutting SK, Arruda A, Doedens M, Travas A, Kim DDH, Capo-Chichi JM, Abelson S PhD, Minden MD, Wang JC, Sobrinho-Simões MA, Pinto-do-Ó P, Lechman ER, Dick JE

Cholesterol mobilization regulates dendritic cell maturation and the immunogenic response to cancer

Nature Immunology, Jan 26, 2025

Belabed M, Park MD, Blouin CM, Balan S, Moon CY, Freed G, Quijada-Álamo M, Peros A, Mattiuz R, Reid AM, Yatim N, Boumelha J, Azimi CS, LaMarche NM, Troncoso L, Amabile A, Le Berichel J, Chen ST, Wilk CM, Brown BD, Radford KJ, Ghosh S, Rothlin CV, Yvan-Charvet L, Marron TU, Puleston DJ, Wagenblast E, Bhardwaj N, Lamaze C, Merad M